Dr. Lara-Peña, Carlos

Coastal wetlands are highly threatened by human activities, leading to water quality degradation and biodiversity loss. This study assessed spatial variation in 27 water quality parameters, sediment organic matter, and macroinvertebrate assemblages across 12 sites in the estuarine Cruces River wetland (CRW Ramsar site, southern Chile) during summer 2019. Our analysis identified three areas of sampling stations in the wetland, categorized by trophic gradient and salinity: freshwater (n = 5), mixed (n = 3), and estuary (n = 4). Freshwater sites were characterized by low salinity, turbidity, and high nitrate concentrations. Estuarine sites were characterized by higher salinities and turbidity and low nitrates and total organic carbon (TOC) concentrations, and mixed sites had low salinities, high turbidities, high TOC, and low nitrates. Throughout the CRW, the richness and densities of different invertebrates were recorded. Freshwater stations had higher species richness, and estuary stations had higher abundance. Macroinvertebrates found in the lower reaches of the CRW included species characteristic of estuarine environments, whereas the upper stations were dominated by invertebrates inhabiting low-salinity environments. According to the ordination plot of distance-based redundancy analysis (dbRDA) and distance-based linear model (DistLM), our results indicate that macroinvertebrate assemblages differ significantly among areas of the CRW, primarily due to physicochemical variables (i.e., salinity, total carbon, and dissolved phosphorus). Total organic matter content in sediments was higher in freshwater sites and lower in estuarine sites. Our findings will be used to monitor the wetland and implement appropriate management measures for human activities, thereby protecting and conserving the estuarine Cruces River Ramsar wetland.

The role of rapid adaptation during species invasions has historically been minimized with the assumption that introductions consist of few colonists and limited genetic diversity. While overwhelming evidence suggests that rapid adaptation is more prevalent than originally assumed, the demographic and adaptive processes underlying successful invasions remain unresolved. Here we leverage a large whole-genome sequence dataset to investigate the relative roles of colonization history and adaptation during the worldwide invasion of the forage crop, Trifolium repens (Fabaceae). We show that introduced populations encompass high levels of genetic variation with little evidence of bottlenecks. Independent colonization histories on different continents are evident from genome-wide population structure. Five haploblocks—large haplotypes with limited recombination—on three chromosomes exist as standing genetic variation within the native and introduced ranges and exhibit strong signatures of parallel climate-associated adaptation across continents. Field experiments in the native and introduced ranges demonstrate that three of the haploblocks strongly affect fitness and exhibit patterns of selection consistent with local adaptation across each range. Our results provide strong evidence that large-effect structural variants contribute substantially to rapid and parallel adaptation of an introduced species throughout the world.

Coastal wetlands are highly threatened by human activities, leading to water quality degradation and biodiversity loss. This study assessed spatial variation in 27 water quality parameters, sediment organic matter, and macroinvertebrate assemblages across 12 sites in the estuarine Cruces River wetland (CRW Ramsar site, southern Chile) during summer 2019. Our analysis identified three areas of sampling stations in the wetland, categorized by trophic gradient and salinity: freshwater (n = 5), mixed (n = 3), and estuary (n = 4). Freshwater sites were characterized by low salinity, turbidity, and high nitrate concentrations. Estuarine sites were characterized by higher salinities and turbidity and low nitrates and total organic carbon (TOC) concentrations, and mixed sites had low salinities, high turbidities, high TOC, and low nitrates. Throughout the CRW, the richness and densities of different invertebrates were recorded. Freshwater stations had higher species richness, and estuary stations had higher abundance. Macroinvertebrates found in the lower reaches of the CRW included species characteristic of estuarine environments, whereas the upper stations were dominated by invertebrates inhabiting low-salinity environments. According to the ordination plot of distance-based redundancy analysis (dbRDA) and distance-based linear model (DistLM), our results indicate that macroinvertebrate assemblages differ significantly among areas of the CRW, primarily due to physicochemical variables (i.e., salinity, total carbon, and dissolved phosphorus). Total organic matter content in sediments was higher in freshwater sites and lower in estuarine sites. Our findings will be used to monitor the wetland and implement appropriate management measures for human activities, thereby protecting and conserving the estuarine Cruces River Ramsar wetland.

Kelp forest are foundation species that deliver key ecosystem services for coastal habitats. Chile is one of the largest exporters of kelp biomass, which relies on the harvesting of wild populations. The vast and rugged coastline of Chile hinders field-based studies of the seasonal and spatial dynamics of kelp biomass, yet remote sensing approaches can provide an effective tool to study temporal patterns of kelp distribution and biomass. Our study aimed to establish the basic patterns of variation in the surface area and biomass of a Macrocystis pyrifera forest off Concepcion Bay, Central Chile. Using archival data from the Landsat series we constructed a long-term series of annual kelp canopy cover and assessed patterns of interannual, and a seasonal variation with the more recent Sentinel 2 data using Google Earth Engine. We validated satellite observations of the kelp forest in the field by recording local temperature and nutrient concentrations and through a sample of blades and stipes, which we used to estimate whole-individual in situ biomass through allometric relationships. Finally, we related decadal to interannual changes in canopy cover to local and regional drivers using data from public repositories. Our 24-year annual time series revealed large year-to-year variability in kelp forest area that did not show a significant association with different El Niño-Southern Oscillation indices, but the deviance explained increased notably with a 1-year lag. The seasonal time series exhibited clear seasonal patterns with cover peaking during summer. We found a significant influence of local environmental variables such as temperature, wave height, nitrate concentration, and solar radiation on kelp forest area. Furthermore, blade counts appeared as the most reliable metric for estimating M. pyrifera biomass. Interestingly, we found no evidence of temperature or nutrient stress during the summer biomass peak, hence seasonal variation in M. pyrifera abundance appears to be primarily influenced by solar radiation and wave activity in our study population. Our results provide a basis to derive seasonal time series across Chile’s kelp forests and suggest that understanding local stressors is key to ensure harvesting practices that promote the sustainable management of these key habitats. As ongoing climate change and overexploitation threaten kelp forest habitats, remote sensing emerges as a promising tool for the monitoring and management of extensive and remote coastlines.

Turbidity is associated with the loss of water transparency due to the presence of particles, sediments, suspended solids, and organic or inorganic compounds in the water, of natural or anthropogenic origin. Our study aimed to evaluate the spatio-temporal variability of turbidity from Sentinel-2 (S2) images in the Reloncaví sound and fjord, in Northern Patagonia, Chile, a coastal ecosystem that is intensively used by finfish and shellfish aqua culture. To this end, we downloaded 123 S2 images and assembled a five-year time series (2016–2020) covering five study sites (R1 to R5) located along the axis of the fjord and seaward into the sound. We used Acolite to perform the atmospheric correction and estimate turbidity with two algorithms proposed by Nechad et al. (2009, 2016 Nv09 and Nv16, respectively). When compared to match-up, and in situ measurements, both algorithms had the same performance (R2 = 0.40). The Nv09 algorithm, however, yielded smaller errors than Nv16 (RMSE = 0.66 FNU and RMSE = 0.84 FNU, respectively). Results from true-color imagery and two Nechad algorithms singled an image from the austral autumn of 2019 as the one with the highest turbidity. Similarly, three images from the 2020 austral autumn (May 20, 25, 30) also exhibited high turbidity values. The turbid plumes with the greatest extent occurred in the autumn of 2019 and 2020, coinciding with the most severe storms and runoff events of the year, and the highest turbidity values. Temporal trends in turbidity were not significant at any of the study sites. However, turbidity trends at sites R1 and R2 suggested an increasing trend, while the other sites showed the opposite trend. Site R1 recorded the highest turbidity values, and the lowest values were recorded at R5 in the center of the sound. The month of May was characterized by the highest turbidity values. The application of algorithms from high-resolution satellite images proved to be effective for the estimation and mapping of this water quality parameter in the study area. The use of S2 imagery unraveled a predictable spatial and temporal structure of turbidity patterns in this optically complex aquatic environment. Our results suggest that the availability of in situ data and the continued evaluation of the performance of the Nechad algorithms can yield significant insights into the dynamics and impacts of turbid waters in this important coastal ecosystem.

The coastal ocean off western Patagonia is one of the main coastal regions with high freshwater inputs from rivers, rain, and glaciers in the Southern Hemisphere. This study conducts an analysis of the seasonal and interannual variations in sea surface salinity and meridional geostrophic transports, specifically focusing on the Cape Horn Current, using improved satellite-derived data of sea surface salinity (SSS) and geostrophic velocities spanning an ∼11-year period (September 2011–August 2022). Our results reveal a clear salinity minimum in a coastal band between 42–54°S associated with the highest freshwater content. The average geostrophic currents are stronger south of 49°S, in line with the location of the Cape Horn Current. The average salinity minimum tends to disappear south of 54°S, with salinity values increasing slightly southward. The seasonal cycle of salinity shows the most pronounced minimum in summer (∼33.2–33.4). The greatest variability in salinity (standard deviation of salinity fields) occurs in the southern region of the Cape Horn Current. Hovmöller plots reveal two cores of minimum salinity observed in spring and summer (∼33.3–33.4). The freshwater off the Gulf of Penas contributes to the northern core. The meridional geostrophic transport differs between the northern and southern sections, with transports predominantly towards the Equator (Pole) north (south) of about 47–48°S during spring–summer. There is a marked seasonal variability in the magnitude and northern limit of the southward-flowing Cape Horn Current, being extended further north during winter and with a maximum average magnitude during summer–fall (about −2×104 m2 s−1). On the interannual scale, a major drop in surface salinity occurred off northern and central Patagonia during 2018–2019. Finally, a potential long-term freshening trend is observed in the coastal area off southern Patagonia (south of 52°S), although prolonged data records are essential to confirm this pattern.

Worldwide climate‐driven shifts in the distribution of species is of special concern when it involves habitat‐forming species. In the coastal environment, large Laminarian algae—kelps—form key coastal ecosystems that support complex and diverse food webs. Among kelps, Macrocystis pyrifera is the most widely distributed habitat‐forming species and provides essential ecosystem services. This study aimed to establish the main drivers of future distributional changes on a global scale and use them to predict future habitat suitability. Using species distribution models (SDM), we examined the changes in global distribution of M. pyrifera under different emission scenarios with a focus on the Southeast Pacific shores. To constrain the drivers of our simulations to the most important factors controlling kelp forest distribution across spatial scales, we explored a suite of environmental variables and validated the predictions derived from the SDMs. Minimum sea surface temperature was the single most important variable explaining the global distribution of suitable habitat for M. pyrifera. Under different climate change scenarios, we always observed a decrease of suitable habitat at low latitudes, while an increase was detected in other regions, mostly at high latitudes. Along the Southeast Pacific, we observed an upper range contraction of −17.08° S of latitude for 2090–2100 under the RCP8.5 scenario, implying a loss of habitat suitability throughout the coast of Peru and poleward to −27.83° S in Chile. Along the area of Northern Chile where a complete habitat loss is predicted by our model, natural stands are under heavy exploitation. The loss of habitat suitability will take place worldwide: Significant impacts on marine biodiversity and ecosystem functioning are likely. Furthermore, changes in habitat suitability are a harbinger of massive impacts in the socio‐ecological systems of the Southeast Pacific.

Spatial synchrony occurs when geographically separated time series exhibit correlated temporal variability. Studies of synchrony between different environmental variables within marine ecosystems worldwide have highlighted the extent of system responses to exogenous large-scale forcing. However, these spatial connections remain largely unstudied in marine systems, particularly complex coastlines, where a paucity of field observations precludes the analysis of time series. Here, we used time-frequency analyses based on wavelet and wavelet coherence (WC) analysis to quantify the synchrony (co-variations) between environmental time series derived from MODIS (moderate resolution imaging spectroradiometer) in the topographically complex inner sea of Chiloé (ISC, 41–44°S) for the 2003–2022 period. We find that the strength of the synchrony between chlorophyll a (𝐶ℎ𝑙𝑎) and turbid river plumes (for which we use remote sensing reflectance at 645 nm, 𝑅𝑟𝑠645) varies between the northern and southern areas of the ISC; higher synchrony, measured as the WC between these variables, is observed along the northern basin where water and particle exchanges with the Pacific Ocean are reduced. The WC analysis showed higher synchrony between these variables, with dominant periodicities of 0.5 and 1 year resulting from the hydrological regime of the freshwater input in the area that persisted throughout the 2004–2018 period. Our results suggest that the strong and significant spatial synchrony at the regional scale is likely related to the phases of large-scale climatic oscillations, as inferred through the partial wavelet coherence analysis. Potential mechanisms driving spatial synchrony are discussed in the context of climate and oceanographic regimes in the area.

This study assessed natural variation in the macroinvertebrate assemblages (MIB) and water quality in one of the main basins with the largest agricultural activities in Chile (Aconcagua River Basin). We sampled throughout the annual cycle; nine sampling sites were established along the basin, classifying according to agricultural area coverage as least-disturbed, intermediate, and most-disturbed. We collected 56 macroinvertebrate taxa throughout the entire study area. Multivariate analysis shows significant differences among the three disturbance categories in different seasons, both water quality variables and the MIB structure. Distance-based linear model (DistLM) analysis for all seasons explained more than 95.9% of the macroinvertebrate assemblages, being significantly explained by chemical oxygen demand, pH, total coliforms, nitrites, elevation, and water temperature. ANOVA test revealed significant differences in the proportion of noninsect individuals, macroinvertebrates density, and the number of taxa among the three disturbance categories (p < 0.05). In general, water temperature, conductivity, chemical oxygen demand, ammonium, nitrites, and nitrates increased their values downstream in the basin. Our results indicate that the elevation gradient and increment in agricultural land use in the basin had a strong influence on water quality and MIB. A better understanding of these ecosystems could help conservation and integrated watershed management.

The coastal region off Chilean Patagonia has been poorly studied due to the lack of available observations. Here we analyzed, by the very first time, biogeochemical (BGC) data to elucidate the role that biological and physical processes play on nitrate, oxygen, pH and hydrographic variables, along a salinity gradient off central Patagonia. Argo float profiles covering the upper ocean from December 2015 to July 2019 reveal that offshore waters are characterized by low temperatures and high salinities related to high oxygen and medium-high values of pH and nitrate. As the Argo float drifted onshore, freshwater influences the upper 50–100 m with low salinity and high temperature. Waters under the influence of the continental runoff were characterized by medium-to-high oxygen and pH levels, and the lowest nitrate concentrations. Interestingly, oxygen-deficient waters located beneath the freshwater-modified layer showed the lowest pH and highest nitrate. A comprehensive analysis of the temporal and vertical variability of the oxygen:nitrate ratio, in conjunction with biological-related and physical parameters, indicates that the BGC variability seems to be the result of a synergistic interaction between physical and biological processes, where the stratification sets up the environment and promotes the biological response that, in turn, is auto-regulated by modifying the chemical composition in the freshwater-influenced zone. The arrival of future floats with additional sensors (Chlorophyll/Fluorescence, Photosynthetically Active Radiation, Backscatter, etc.) will add new BGC properties that improve our understanding of the coastal marine response to the increasing freshwater input off western Patagonia in the context of climate change.